| | Approximately 40x average depth of coverage of the sample (human male genome) was generated |
| | using Illumina sequencing (paired 35 base reads). Read pairs were aligned to the reference |
| | (NCBI 36) using ELAND or MAQ. SNP predictions were made by Illumina using the ELAND alignment |
| | and by the Wellcome Trust Sanger Institute using the MAQ alignment. Alignment to the NCBI36.1 |
| | reference sequence was used to identify single nucleotide differences from the reference that |
| | are either homozygous or heterozygous in the sequenced individual. A total of 3,612,498 high |
| | confidence SNPs are in the intersection of the two methods (ELAND and MAQ) and are submitted |
| | here. |
| | PARAMETER: |
