NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss287939187           
Submitter
HandleGMI
Submitter SNP IDGMI_AK_INDEL_6
RefSNP(rs#)rs199543075
Submitted Batch ID2009AK_INDEL
Submitted DateDec 20, 2010
Publication CitedN.D.
First entry to dbSNPDec 20 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodDIRECT DNA SEQUENCING
Ascertainment Samplesize2
PopulationAK_Koreans
Allele
Observed AlleleAA/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Chromosome-1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss287939187|allelePos=501|len=1001|taxid=9606|alleles='AA/-'|mol=Genomic
 GGCCAACATT TATCTTCTTG ATCTGGGTCT TCTCCTACAG TTCTGACTTT TTCACTAACT
 GCAGCATCAT TTCTTTTCCA AGATGCATCA TACAGATATT TTTCATTTGT GTCATGCGTA
 AAAATTGAGA TGGTGCTGCT CATAACCATG GCATAGAGCA GGTACACTGC CAATCTGTAA
 GCCTCCCCAT TACCTGACCA CAATGAACCC CAAAATGTGT GTTTCCTTTG TTGGAGGCAT
 CCTGGATAGT CAGGATAATC CATGCTGTAT CTCAGTTTGT TTTTGCCATA AACTTGCCTT
 TTTGTGGCCC TAATAGAGTA GGTAGTTTTC ACTGTGATTT TCCTTATGTC ATGAAACTTG
 CTTGTGTAGA CACTTACAAA CTAGAGGTTG TAGTCACTGC TAACAGTGGG CTTATATCCA
 TAGCTACCTG TTTCTTATTA ATAATATCCT ATATTTTCAT TTCGGTAACC GTCTAGAATC
 CTTCTTCAGG AGACTTATCT
 N
 AGCATTTGTG TCATGTTAGA TCACATCACA GTAGGGATTT TGTTTTTTAT GCCATGTATA
 TTTCTGTATG TGTAGCCTTT GCCTAAAACA ACACATGATT AATATTTGTT CATTGTTCCT
 TTTGCTATCA CCCCTGTCTA GGATCTACAC ATTAAGAAAC AAAGACATGA ACGTCTCCAT
 GGAAAGACTG GGAAAATGGA TTGCAGGTTC TAGCAGGATG TCATAATAAA TGGTGCATAT
 CCAGAGTGCA AGATGATTCA GTCTCACCAA GAACACTGAA AGTCACATGG CTACCAGCAT
 TATTGTGATA AGAACTACTA TTTTGGGAGA TAGTTTAGCA AAGGTGCCAT GTAGAAATTG
 ATTAAGTCAG AGGTATCTTT AACTTGCCAC CACAGAGAAG AGATTAATTT CATATACTTC
 CATTGAGAAG AGAGATAAGA ATACAAAACC AAGCTGATTT GCAGGAGTAA ACTTGATATT
 CAAATACTAT TTCCTGAATG

  Submitted Frequency for ss287939187 back to top
There is no frequency submission for ss287939187.


  dbSNP summary of Genotypes for ss287939187 back to top
No sufficient data to compute Hardy-weinberg probability for ss287939187.


  Submitted individual genotype for ss287939187 back to top
There is no individual genotype data for ss287939187.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement