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    CG1542 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43691, updated on 27-Dec-2024

    Summary

    Official Symbol
    CG1542provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039828
    Locus tag
    Dmel_CG1542
    See related
    AllianceGenome:FB:FBgn0039828
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG1542; EBP2
    Summary
    Predicted to enable RNA binding activity. Predicted to be involved in rRNA processing and ribosomal large subunit biogenesis. Predicted to be part of preribosome, large subunit precursor. Predicted to be active in nuclear periphery and nucleolus. Is expressed in several structures, including adult head; anterior endoderm; anterior endoderm anlage; embryonic/larval midgut primordium; and larval somatic muscle cell. Orthologous to human EBNA1BP2 (EBNA1 binding protein 2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See CG1542 in Genome Data Viewer
    Location:
    100B6-100B7; 3-102 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (31213458..31214784)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (27039180..27040506)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene chaoptin Neighboring gene zwilch Neighboring gene uncharacterized protein Neighboring gene ATP synthase, subunit C Neighboring gene Ribonuclease P RNA Neighboring gene mir-4949 stem loop

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding  
    Process Evidence Code Pubs
    involved_in rRNA processing  
    involved_in rRNA processing  
    involved_in ribosomal large subunit biogenesis  
    Component Evidence Code Pubs
    is_active_in nuclear periphery  
    is_active_in nucleolus  
    located_in nucleolus  
    part_of preribosome, large subunit precursor  

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG1542-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      31213458..31214784
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143593.4 → NP_651850.1  uncharacterized protein Dmel_CG1542 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651850.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9V9Z9
      Related
      FBpp0085119
      Conserved Domains (1) summary
      pfam05890
      Location:20 → 299
      Ebp2; Eukaryotic rRNA processing protein EBP2
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