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    F-box and associated interaction domains-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820022, updated on 18-Sep-2024

    Summary

    Official Full Name
    F-box and associated interaction domains-containing protein
    Primary source
    TAIR:AT3G08750
    Locus tag
    AT3G08750
    See related
    Araport:AT3G08750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (2656716..2657825, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene protein-serine kinase 1 Neighboring gene elongation factor P (EF-P) family protein Neighboring gene Protein kinase superfamily protein Neighboring gene lipid transfer protein 6

    Interactions

    General gene information

    NM_111709.1

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    is_active_in cellular_component  

    General protein information

    Preferred Names
    F-box and associated interaction domains-containing protein
    NP_187487.1
    • F-box and associated interaction domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT4G04690.1); Has 2081 Blast hits to 2050 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2077; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2656716..2657825 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111709.1NP_187487.1  F-box and associated interaction domains-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187487.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C9Y4
      UniProtKB/TrEMBL
      A0A5S9XA85, A0A654F592
      Conserved Domains (3) summary
      pfam07734
      Location:198364
      FBA_1; F-box associated
      TIGR01640
      Location:95290
      F_box_assoc_1; F-box protein interaction domain
      pfam00646
      Location:953
      F-box; F-box domain
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