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SK14 SKP1-like 14 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814846, updated on 18-Sep-2024

Summary

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Official Symbol
SK14
Official Full Name
SKP1-like 14
Primary source
TAIR:AT2G03170
Locus tag
AT2G03170
See related
Araport:AT2G03170
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ASK14; SKP1-like 14; T18E12.16; T18E12_16
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Genomic context

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See SK14 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (961308..961771)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ATP/GTP-binding protein family Neighboring gene SKP1-like 19 Neighboring gene uncharacterized protein Neighboring gene SKP1-like 16

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. F-box protein DOR functions as a novel inhibitory factor for abscisic acid-induced stomatal closure under drought stress in Arabidopsis, Zhang Y, et al. Plant Physiol, 2008 Dec. PMID 18835996, Free PMC Article
  2. A high-throughput system for two-hybrid screening based on growth curve analysis in microtiter plates. Diaz-Camino C, et al. Anal Biochem, 2003 May 15. PMID 12711337
  3. EDL3 is an F-box protein involved in the regulation of abscisic acid signalling in Arabidopsis thaliana. Koops P, et al. J Exp Bot, 2011 Nov. PMID 21831845, Free PMC Article
  4. An F-box gene, CPR30, functions as a negative regulator of the defense response in Arabidopsis. Gou M, et al. Plant J, 2009 Dec. PMID 19682297
  5. Identification of ASK and clock-associated proteins as molecular partners of LKP2 (LOV kelch protein 2) in Arabidopsis. Yasuhara M, et al. J Exp Bot, 2004 Sep. PMID 15310821

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within ubiquitin-dependent protein catabolic process TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
SKP1-like 14
NP_565296.1
  • SKP1-like 14 (SK14); CONTAINS InterPro DOMAIN/s: E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897), SKP1 component, dimerisation (InterPro:IPR016072), SKP1 component (InterPro:IPR001232), BTB/POZ fold (InterPro:IPR011333), SKP1 component, POZ (InterPro:IPR016073); BEST Arabidopsis thaliana protein match is: SKP1-like 16 (TAIR:AT2G03190.1); Has 1405 Blast hits to 1401 proteins in 267 species: Archae - 0; Bacteria - 0; Metazoa - 530; Fungi - 176; Plants - 531; Viruses - 11; Other Eukaryotes - 157 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    961308..961771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126368.2 → NP_565296.1  SKP1-like 14 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565296.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O81057
    UniProtKB/TrEMBL
    A0A178VVZ2
    Conserved Domains (3) summary
    smart00512
    Location:3 → 99
    Skp1; Found in Skp1 protein family
    COG5201
    Location:3 → 147
    SKP1; SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones]
    pfam01466
    Location:72 → 147
    Skp1; Skp1 family, dimerization domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O81057.1

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