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SEH1H Transducin/WD40 repeat-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842741, updated on 18-Sep-2024

Summary

Official Symbol
SEH1H
Official Full Name
Transducin/WD40 repeat-like superfamily protein
Primary source
TAIR:AT1G64350
Locus tag
AT1G64350
See related
Araport:AT1G64350
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15H21.21
Summary
seh1-like protein
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Genomic context

See SEH1H in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (23881512..23883354)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene myosin heavy chain-like protein Neighboring gene Serine/Threonine-kinase Neighboring gene 1-acyl-sn-glycerol-3-phosphate acyltransferase Neighboring gene uncharacterized protein

Interactions

General gene information

NM_105109.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding PubMed 
enables structural molecule activity  
Component Evidence Code Pubs
located_in chloroplast  
located_in nuclear envelope PubMed 

General protein information

Preferred Names
Transducin/WD40 repeat-like superfamily protein
NP_564830.1
  • SEH1H; FUNCTIONS IN: nucleotide binding; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT2G30050.1); Has 1315 Blast hits to 1213 proteins in 251 species: Archae - 0; Bacteria - 230; Metazoa - 335; Fungi - 407; Plants - 224; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    23881512..23883354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105109.4NP_564830.1  Transducin/WD40 repeat-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564830.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LB12, Q93VR9, Q9C5X7, Q9C7V9
    UniProtKB/TrEMBL
    A0A178WA50, A0A5S9WS05
    Conserved Domains (2) summary
    sd00039
    Location:1354
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:10308
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
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