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Items: 1 to 20 of 207

1.
Value/Rank Plot

pgaC - Indole acrylate treatment: time course (II)

Annotation:
pgaC, biofilm PGA synthase PgaCD, catalytic subunit; poly-beta-1,6-N-acetyl-D-glucosamine synthase
Organism:
Escherichia coli
Reporter:
GPL3503, 1022 (ID_REF), GDS2582, B1022 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 4 samples
ID:
35534422

GEO DataSets Gene Profile neighbors Chromosome neighbors

2.
Value/Rank Plot

pgaB - High temperature adapted strains

Annotation:
pgaB, poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein
Organism:
Escherichia coli
Reporter:
GPL189, 2984 (ID_REF), GDS1848, b1023 (ORF)
DataSet type:
Expression profiling by array, count, 12 samples
ID:
21086784

GEO DataSets Gene Profile neighbors Chromosome neighbors

3.
Value/Rank Plot

pgaA - gyrA parC double mutant response to norfloxacin treatment: time course (I)

Annotation:
pgaA, biofilm adhesin polysaccharide PGA secretin; OM porin; poly-beta-1,6-N-acetyl-D-glucosamine export protein
Organism:
Escherichia coli
Reporter:
GPL3503, 1024 (ID_REF), GDS2595, B1024 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 5 samples
ID:
35594224

GEO DataSets Gene Profile neighbors Chromosome neighbors

4.
Value/Rank Plot

pgaC - Heat shock factor sigma32 overexpression: time course

Annotation:
pgaC, biofilm PGA synthase PgaCD, catalytic subunit; poly-beta-1,6-N-acetyl-D-glucosamine synthase
Organism:
Escherichia coli
Reporter:
GPL3500, 7_11_11 (ID_REF), GDS1804, b1022 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 16 samples
ID:
20212211

GEO DataSets Gene Profile neighbors Chromosome neighbors

5.
Value/Rank Plot

pgaD - Heat shock factor sigma32 overexpression: time course

Annotation:
pgaD, biofilm PGA synthase PgaCD, regulatory subunit; c-di-GMP-stimulated activity and dimerization
Organism:
Escherichia coli
Reporter:
GPL3500, 5_11_5 (ID_REF), GDS1804, b1021 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 16 samples
ID:
20211405

GEO DataSets Gene Profile neighbors Chromosome neighbors

6.
Value/Rank Plot

pgaC - Stationary phase: time course

Annotation:
pgaC, biofilm PGA synthase PgaCD, catalytic subunit; poly-beta-1,6-N-acetyl-D-glucosamine synthase
Organism:
Escherichia coli
Reporter:
GPL3503, 1022 (ID_REF), GDS2600, B1022 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 6 samples
ID:
35617222

GEO DataSets Gene Profile neighbors Chromosome neighbors

7.
Value/Rank Plot

pgaC - Tryptophan metabolism (ecoli_3.0)

Annotation:
pgaC, biofilm PGA synthase PgaCD, catalytic subunit; poly-beta-1,6-N-acetyl-D-glucosamine synthase
Organism:
Escherichia coli
Reporter:
GPL16, 3762 (ID_REF), GDS95, B1022 (ORF)
DataSet type:
Expression profiling by array, log ratio, 9 samples
ID:
558062

GEO DataSets Gene Profile neighbors Chromosome neighbors

8.
Value/Rank Plot

pgaA - Indole acrylate treatment: time course (II)

Annotation:
pgaA, biofilm adhesin polysaccharide PGA secretin; OM porin; poly-beta-1,6-N-acetyl-D-glucosamine export protein
Organism:
Escherichia coli
Reporter:
GPL3503, 1024 (ID_REF), GDS2582, B1024 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 4 samples
ID:
35534424

GEO DataSets Gene Profile neighbors Chromosome neighbors

9.
Value/Rank Plot

pgaD - Norfloxacin treatment: time course

Annotation:
pgaD, biofilm PGA synthase PgaCD, regulatory subunit; c-di-GMP-stimulated activity and dimerization
Organism:
Escherichia coli
Reporter:
GPL3503, 1021 (ID_REF), GDS2594, B1021 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 5 samples
ID:
35589621

GEO DataSets Gene Profile neighbors Chromosome neighbors

10.
Value/Rank Plot

pgaD - Gentamicin effect on fur-deficient cells

Annotation:
pgaD, PGA biosynthesis protein (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli str. K-12 substr. MG1655
Reporter:
GPL3154, 1767075_s_at (ID_REF), GDS5162, 1039447 (Gene ID), 912758 (Gene ID), 947503 (Gene ID), 959159 (Gene ID), b1021 (ORF)
DataSet type:
Expression profiling by array, transformed count, 12 samples
ID:
116087022

GEO DataSets Gene Profile neighbors Chromosome neighbors

11.
Value/Rank Plot

pgaA - Enterohemorrhagic Escherichia coli response to epinephrine, norepinephrine, and indole

Annotation:
pgaA, outer membrane protein PgaA (multiple annotations exist)
Organism:
Escherichia coli
Reporter:
GPL3154, 1769025_s_at (ID_REF), GDS2879, 1039425 (Gene ID), 912850 (Gene ID), 945596 (Gene ID), 959162 (Gene ID), b1024 (ORF)
DataSet type:
Expression profiling by array, count, 4 samples
ID:
43131350

GEO DataSets Gene Profile neighbors Chromosome neighbors

12.
Value/Rank Plot

pgaD - Indole acrylate treatment: time course (II)

Annotation:
pgaD, biofilm PGA synthase PgaCD, regulatory subunit; c-di-GMP-stimulated activity and dimerization
Organism:
Escherichia coli
Reporter:
GPL3503, 1021 (ID_REF), GDS2582, B1021 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 4 samples
ID:
35534421

GEO DataSets Gene Profile neighbors Chromosome neighbors

13.
Value/Rank Plot

pgaD - Enterohemorrhagic Escherichia coli response to epinephrine, norepinephrine, and indole

Annotation:
pgaD, PGA biosynthesis protein (multiple annotations exist)
Organism:
Escherichia coli
Reporter:
GPL3154, 1767075_s_at (ID_REF), GDS2879, 1039447 (Gene ID), 912758 (Gene ID), 947503 (Gene ID), 959159 (Gene ID), b1021 (ORF)
DataSet type:
Expression profiling by array, count, 4 samples
ID:
43129422

GEO DataSets Gene Profile neighbors Chromosome neighbors

14.
Value/Rank Plot

pgaC - DNA gyrase inhibition effect on recA, topA, and dnaC mutants: time course

Annotation:
pgaC, biofilm PGA synthase PgaCD, catalytic subunit; poly-beta-1,6-N-acetyl-D-glucosamine synthase
Organism:
Escherichia coli
Reporter:
GPL1436, 3386 (ID_REF), GDS1963, b1022 (ORF)
DataSet type:
Expression profiling by array, log ratio, 16 samples
ID:
22756386

GEO DataSets Gene Profile neighbors Chromosome neighbors

15.
Value/Rank Plot

pgaD - Enterohemorrhagic Escherichia coli biofilm response to 7-hydroxyindole and isatin

Annotation:
pgaD, PGA biosynthesis protein (multiple annotations exist)
Organism:
Escherichia coli
Reporter:
GPL3154, 1767075_s_at (ID_REF), GDS2753, 1039447 (Gene ID), 912758 (Gene ID), 947503 (Gene ID), 959159 (Gene ID), b1021 (ORF)
DataSet type:
Expression profiling by array, count, 4 samples
ID:
39796222

GEO DataSets Gene Profile neighbors Chromosome neighbors

16.
Value/Rank Plot

pgaA - Tryptophan metabolism (ecoli_4.3)

Annotation:
pgaA, biofilm adhesin polysaccharide PGA secretin; OM porin; poly-beta-1,6-N-acetyl-D-glucosamine export protein
Organism:
Escherichia coli
Reporter:
GPL17, 4446 (ID_REF), GDS96, B1024 (ORF)
DataSet type:
Expression profiling by array, log ratio, 9 samples
ID:
564746

GEO DataSets Gene Profile neighbors Chromosome neighbors

17.
Value/Rank Plot

pgaD - Multiple bactericidal antibiotics

Annotation:
pgaD, PGA biosynthesis protein (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli str. K-12 substr. MG1655
Reporter:
GPL3154, 1767075_s_at (ID_REF), GDS5160, 1039447 (Gene ID), 912758 (Gene ID), 947503 (Gene ID), 959159 (Gene ID), b1021 (ORF)
DataSet type:
Expression profiling by array, transformed count, 18 samples
ID:
116039722

GEO DataSets Gene Profile neighbors Chromosome neighbors

18.
Value/Rank Plot

pgaB - NOX overexpressing cells at various growth rates

Annotation:
pgaB, poly-beta-1,6-N-acetyl-D-glucosamine (PGA) N-deacetylase outer membrane export lipoprotein
Organism:
Escherichia coli
Reporter:
GPL3503, 1023 (ID_REF), GDS2592, B1023 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 5 samples
ID:
35580423

GEO DataSets Gene Profile neighbors Chromosome neighbors

19.
Value/Rank Plot

pgaA - Heat shock factor sigma32 overexpression: time course

Annotation:
pgaA, biofilm adhesin polysaccharide PGA secretin; OM porin; poly-beta-1,6-N-acetyl-D-glucosamine export protein
Organism:
Escherichia coli
Reporter:
GPL3500, 8_18_10 (ID_REF), GDS1804, b1024 (ORF)
DataSet type:
Expression profiling by array, log2 ratio, 16 samples
ID:
20212750

GEO DataSets Gene Profile neighbors Chromosome neighbors

20.
Value/Rank Plot

pgaB - Escherichia coli O157:H7 response to cinnamaldehyde: time course

Annotation:
pgaB, outer membrane N-deacetylase (multiple annotations exist)
Organism:
Escherichia coli, Escherichia coli O157:H7
Reporter:
GPL3154, 1766584_s_at (ID_REF), GDS4321, 1039403 (Gene ID), 912831 (Gene ID), 945604 (Gene ID), 959161 (Gene ID), b1023 (ORF)
DataSet type:
Expression profiling by array, transformed count, 8 samples
ID:
87607933

GEO DataSets Gene Profile neighbors Chromosome neighbors

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