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GEO accession:
Sample GSM83894
Query DataSets for GSM83894
Status
Public on Jun 01, 2007
Title
kontrolli_DC_D
Sample type
RNA
Source name
monocyte derived DCs
Organism
Homo sapiens
Characteristics
in vitro differentiated DCs
Growth protocol
IL-4+GM-CSF for seven days
Extracted molecule
total RNA
Extraction protocol
Trizol + RNeasy
Label
biotin
Label protocol
Enzo Bioarray High Yield RNA Transcript labeling kit
Hybridization protocol
Affymetrix
Scan protocol
Affymetrix
Description
control
Data processing
MAS 5.0, scaled to 100
Submission date
Nov 17, 2005
Last update date
May 31, 2007
Contact name
Anna Kiialainen
E-mail(s)
[email protected]
Phone
+46186114951
Organization name
Uppsala University
Department
Deapartment of Medical Sciences
Street address
University Hospital, Entrance 70
City
Uppsala
ZIP/Postal code
75185
Country
Sweden
Platform ID
GPL96
Series (1)
GSE3624
Transcript profiles of DCs of PLOSL patients show abnormalities in pathways of actin bundling and immune response
Data table header descriptions
ID_REF
VALUE
MAS5 transformed
ABS_CALL
Affymetrix flags
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
61.0
P
AFFX-BioB-M_at
97.5
P
AFFX-BioB-3_at
50.4
P
AFFX-BioC-5_at
143.3
P
AFFX-BioC-3_at
110.5
P
AFFX-BioDn-5_at
108.6
P
AFFX-BioDn-3_at
824.4
P
AFFX-CreX-5_at
1158.9
P
AFFX-CreX-3_at
1976.0
P
AFFX-DapX-5_at
6.7
A
AFFX-DapX-M_at
13.5
P
AFFX-DapX-3_at
2.5
A
AFFX-LysX-5_at
4.0
A
AFFX-LysX-M_at
12.1
A
AFFX-LysX-3_at
4.8
A
AFFX-PheX-5_at
1.3
A
AFFX-PheX-M_at
1.2
A
AFFX-PheX-3_at
15.3
A
AFFX-ThrX-5_at
2.2
A
AFFX-ThrX-M_at
10.5
A
Total number of rows:
22283
Table truncated, full table size
392 Kbytes
.
Supplementary data files not provided
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