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GEO accession:
Sample GSM83890
Query DataSets for GSM83890
Status
Public on Jun 01, 2007
Title
potilas_DC_B
Sample type
RNA
Source name
monocyte derived DCs
Organism
Homo sapiens
Characteristics
in vitro differentiated DCs
Growth protocol
IL-4+GM-CSF for seven days
Extracted molecule
total RNA
Extraction protocol
Trizol + RNeasy
Label
biotin
Label protocol
Enzo Bioarray High Yield RNA Transcript labeling kit
Hybridization protocol
Affymetrix
Scan protocol
Affymetrix
Description
DAP12mut
Data processing
MAS 5.0, scaled to 100
Submission date
Nov 17, 2005
Last update date
May 31, 2007
Contact name
Anna Kiialainen
E-mail(s)
[email protected]
Phone
+46186114951
Organization name
Uppsala University
Department
Deapartment of Medical Sciences
Street address
University Hospital, Entrance 70
City
Uppsala
ZIP/Postal code
75185
Country
Sweden
Platform ID
GPL96
Series (1)
GSE3624
Transcript profiles of DCs of PLOSL patients show abnormalities in pathways of actin bundling and immune response
Data table header descriptions
ID_REF
VALUE
MAS5 transformed
ABS_CALL
Affymetrix flags
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
65.6
P
AFFX-BioB-M_at
103.2
P
AFFX-BioB-3_at
42.5
P
AFFX-BioC-5_at
164.5
P
AFFX-BioC-3_at
118.2
P
AFFX-BioDn-5_at
156.7
P
AFFX-BioDn-3_at
965.6
P
AFFX-CreX-5_at
1441.6
P
AFFX-CreX-3_at
2240.0
P
AFFX-DapX-5_at
2.3
A
AFFX-DapX-M_at
13.1
A
AFFX-DapX-3_at
1.8
A
AFFX-LysX-5_at
3.2
A
AFFX-LysX-M_at
9.3
A
AFFX-LysX-3_at
3.8
A
AFFX-PheX-5_at
1.4
A
AFFX-PheX-M_at
1.4
A
AFFX-PheX-3_at
4.6
A
AFFX-ThrX-5_at
2.3
A
AFFX-ThrX-M_at
9.9
A
Total number of rows:
22283
Table truncated, full table size
392 Kbytes
.
Supplementary data files not provided
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