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Sample GSM763515 Query DataSets for GSM763515
Status Public on Jan 30, 2012
Title Patient P4 @LS
Sample type RNA
 
Source name Patient P4 @LS
Organism Homo sapiens
Characteristics patient: P4
group: LS
tissue: skin
treatment: efalizumab
disease state: psoriasis
time: baseline
disease status: lesional
Extracted molecule total RNA
Extraction protocol Whole skin punch biopsies were homogenized in RLT with Beta-2-mercaptoethanol, RNA was extracted using RNeasy-Micro kit (QIAGEN, Valencia, CA).
Label biotin
Label protocol GeneChip Two-Cycle cDNA Synthesis Kit (Affymetrix )
 
Hybridization protocol GeneChip Two-Cycle cDNA Synthesis Kit (Affymetrix )
Scan protocol Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Jul 19, 2011
Last update date Apr 04, 2012
Contact name Mayte Suarez-Farinas
E-mail(s) [email protected]
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL571
Series (1)
GSE30768 Post-therapeutic relapse of psoriasis associated with CD11a blockade is associated with T cells and inflammatory myeloid DCs

Data table header descriptions
ID_REF
VALUE Normalized Expression values in log-2 scale

Data table
ID_REF VALUE
1007_s_at 8.564541001
1053_at 6.334473509
117_at 3.582894606
121_at 5.340578408
1255_g_at 2.1752396
1294_at 3.197689502
1316_at 5.701061287
1320_at 2.194818072
1405_i_at 5.01931654
1431_at 4.303626785
1438_at 3.41848874
1487_at 6.770017074
1494_f_at 2.1752396
1598_g_at 9.004259906
160020_at 6.209088431
1729_at 6.987720272
177_at 3.374479532
1773_at 2.1752396
179_at 2.1752396
1861_at 3.850167064

Total number of rows: 22277

Table truncated, full table size 485 Kbytes.




Supplementary file Size Download File type/resource
GSM763515_Chip14_P4_LS.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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