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Sample GSM603100 Query DataSets for GSM603100
Status Public on Oct 10, 2010
Title KU-812 Imatinib-treated
Sample type RNA
 
Source name CML cell line: KU-812
Organism Homo sapiens
Characteristics cell line: KU-812
tissue: Myeloid leukemia cells
agent: Imatinib
Extracted molecule total RNA
Extraction protocol Extraction Method: Qiagen RNeasy Kit
Label Biotin
Label protocol Standard Affymetrix protocols (Affymetrix GeneChip Expression Analysis Technical Manual)
 
Hybridization protocol Standard Affymetrix protocols (Affymetrix GeneChip Expression Analysis Technical Manual)
Scan protocol Standard Affymetrix protocols (Affymetrix GeneChip Expression Analysis Technical Manual)
Description KU-812 leukemia cells were incubated with 10 µM STI571 (Imatinib) for 16 hours.
For more information about the cell line, please check: www.dsmz.de
Q249_A_HG_U133_Plus_2_01_1__UU812_STI_.CEL
Data processing RMA signal intensities obtained using BRB-arraytool software which calculates the RMA-values with the affy package from Bioconductor.
 
Submission date Oct 03, 2010
Last update date Oct 05, 2010
Contact name Markus Müschen
E-mail(s) [email protected]
Phone + 1 323 361 5592
Fax +1 323 361 1516
URL http://www.lymphocytes.de/
Organization name University of Southern California
Department Childrens Hospital Los Angeles
Lab Müschen Lab
Street address 4650 Sunset Blvd
City Los Angeles
State/province CA
ZIP/Postal code 90027
Country USA
 
Platform ID GPL570
Series (1)
GSE24493 Effect of Imatinib on chronic myelogenous leukemia

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensities

Data table
ID_REF VALUE
1007_s_at 101.29
1053_at 219.82
117_at 71.75
121_at 177.35
1255_g_at 7.80
1294_at 164.77
1316_at 34.97
1320_at 12.65
1405_i_at 284.75
1431_at 10.84
1438_at 39.60
1487_at 286.88
1494_f_at 56.83
1552256_a_at 152.00
1552257_a_at 409.73
1552258_at 81.17
1552261_at 15.97
1552263_at 124.95
1552264_a_at 356.25
1552266_at 8.79

Total number of rows: 54675

Table truncated, full table size 907 Kbytes.




Supplementary file Size Download File type/resource
GSM603100.CEL.gz 4.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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