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Sample GSM5968495 Query DataSets for GSM5968495
Status Public on Mar 01, 2023
Title Allo spleen cells CTLA4-Ig EPO 4
Sample type RNA
 
Source name splenic CD11b+ myeloid cells
Organism Mus musculus
Characteristics treatment: Allo spleen cells CTLA4-Ig EPO
cell type: splenic CD11b+ myeloid cells
Growth protocol Groups of wild type C57BL/6 mice were either untreated (naive, group D) or were injected i.p. with 20e6 allogeneic T cell depleted BALB/c splenocytes alone (group FN) with CTLA4-Ig (150µg i.p. once on day 2, Abatacept, Bristol-Myers Squibb, New York, NY, group DC), or CTLA4Ig plus recombinant EPO (5000 units/kg i.p. daily, epoetin alfa, Amgen, Thousand Oaks, CA, group DCE). On day 7, splenic CD11b+ myeloid cells were isolated by positive selection (kit #18970, STEMCELL, Vancouver, BC, Canada).
Extracted molecule total RNA
Extraction protocol RNA was isolated using TRIzol (Thermo Fisher Scientific, Waltham, MA) and cleaned using RNeasy Mini Kit (Qiagen, Hilden, Germany).
Label N/A
Label protocol N/A
 
Hybridization protocol N/A
Scan protocol N/A
Description DCE4
Data processing Gene expression profiling was then performed using the nCounter® Myeloid Innate Immunity Panel (NanoString Technologies, Seattle, WA). The normalized data were log2 transformed.
 
Submission date Mar 23, 2022
Last update date Mar 03, 2023
Contact name Weijia Zhang
E-mail(s) [email protected]
Organization name Icahn School of Medicine at Mount Sinai
Department Renal
Lab Bioinfomatics
Street address 1 Gustave L. Levy Pl
City New York
State/province NY
ZIP/Postal code 10029
Country USA
 
Platform ID GPL25266
Series (1)
GSE199270 Linking erythropoietin to regulatory T-cell-dependent allograft survival through myeloid cells

Data table header descriptions
ID_REF
VALUE normalized

Data table
ID_REF VALUE
Il4 3.815226301
Cx3cr1 8.686711561
Ear3 10.2724206
Ccl28 0.355794682
Nfatc2 7.453826765
Ccr7 9.995135391
Ccl22 5.083715137
Tnfaip3 10.75132882
Ptprb 2.163149604
Ccl21a 2.940757183
Trim9 3.056234401
Olr1 4.910383534
Ets1 10.90365319
Serpine1 4.355794682
Stat5a 7.823400232
Flrt2 2.355794682
Hip1r 7.262685278
Ndufa7 8.645813529
Ctla4 5.443257524
Mob3c 6.28653202

Total number of rows: 734

Table truncated, full table size 12 Kbytes.




Supplementary file Size Download File type/resource
GSM5968495_20190523_PSH_052319-2_DCE4_04.RCC.gz 8.6 Kb (ftp)(http) RCC
Processed data included within Sample table

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