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Sample GSM596053 Query DataSets for GSM596053
Status Public on Dec 06, 2010
Title Gene expression_sex_1339T
Sample type RNA
 
Source name Biceps Brachii
Organism Homo sapiens
Characteristics gender: female
age: young
condition: 24h post acute resistance exercise following 12-week resistance training
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from frozen tissue with a polytron homogenizer (Brinkman, Westbury, NY) and Trizol reagent (Invitrogen, Rockville, MD) and purified with an RNAse kit (Qiagen, Santa Clara, CA).
Label Biotin
Label protocol Total RNA was used as a template for double-stranded cDNA synthesis (Superscript Double-Stranded cDNA synthesis kit, Invitrogen, Carlsbad, CA). Biotin-labelled cRNA was synthesized by using Enzo Bioarray High Yield RNA transcription Labeling Kit (Affymetrix).
 
Hybridization protocol Hybridized to Affymetrix Human Genome U133 Plus 2.0 arrays (Santa Clara, CA) according to the manufacturer’s instructions.
Scan protocol The intensity of bound dye was measured with an argon laser confocal scanner (GeneArray Scanner, Agilent).
Data processing The probe arrays were scanned twice and the stored images were analyzed using the Expression Console (Affymetrix, Santa Clara, CA). RMA data was derived by using Bioconductor.
 
Submission date Sep 20, 2010
Last update date Dec 06, 2010
Contact name GORDON PAUL
E-mail(s) [email protected]
Organization name University of Michigan
Street address 325 E Eisenhower
City Ann Arbor
State/province MI
ZIP/Postal code 48108
Country USA
 
Platform ID GPL570
Series (1)
GSE24235 Skeletal muscle gene expression in response to resistance exercise: sex specific regulation

Data table header descriptions
ID_REF
VALUE RMA data

Data table
ID_REF VALUE
1007_s_at 8.341753996
1053_at 4.710267966
117_at 3.471436112
121_at 6.292478481
1255_g_at 2.767115807
1294_at 4.696888758
1316_at 4.430813657
1320_at 4.303893253
1405_i_at 2.864788415
1431_at 3.088493315
1438_at 4.254329994
1487_at 7.982772099
1494_f_at 4.727425983
1552256_a_at 4.807167134
1552257_a_at 5.854697584
1552258_at 3.476770832
1552261_at 3.682604404
1552263_at 3.113296673
1552264_a_at 6.52271609
1552266_at 2.853966499

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM596053.CEL.gz 4.4 Mb (ftp)(http) CEL
GSM596053.chp.gz 392.5 Kb (ftp)(http) CHP
Processed data included within Sample table

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