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Sample GSM585240 Query DataSets for GSM585240
Status Public on Aug 21, 2010
Title PaS_4factor_5
Sample type RNA
 
Source name Bone marrow PaS (MSC), infected Oct3/4, Sox2, Klf4, and c-Myc
Organism Mus musculus
Characteristics tissue: Bone marrow
cell source: PaS (MSC)
Extracted molecule total RNA
Extraction protocol Total RNA was purified with Trizol (invitrogen) and treated with Turbo DNA-free kit (Ambion) to remove genomic DNA contamination.
Label Cy3
Label protocol Total RNA from ES cells, PαS cells, OB cells, TTF cells and iPS cells were labelled with Cy3.
 
Hybridization protocol Samples were hybridized to a mouse Oligo Microarray (agilent) according to the manufacturer's protocol.
Scan protocol Arrays were scanned with a G2565BA Microarray Scanner System (Agilent).
Data processing Data were analysed using GeneSprings GX software (Agilent).
 
Submission date Aug 19, 2010
Last update date Aug 20, 2010
Contact name Yumi Matsuzaki
E-mail(s) [email protected]
Phone 81-3-5363-3117
Fax 81-3-5363-3566
Organization name Keio University, School of Medicine
Department Physiology
Street address 35 Shinanomachi
City Shinjuku
State/province Tokyo
ZIP/Postal code 160-8582
Country Japan
 
Platform ID GPL7202
Series (1)
GSE23717 Purified mesenchymal stem cells are an efficient source for iPS cell induction

Data table header descriptions
ID_REF
VALUE normalized signal

Data table
ID_REF VALUE
GE_BrightCorner -0.0951252
DarkCorner 0.7902241
A_52_P616356 -0.002040386
A_52_P580582 1.0100179
A_52_P403405 -0.2632494
A_52_P819156 -0.41294718
A_51_P331831 0.57921886
A_51_P430630 -0.0408597
A_52_P502357 -0.016862392
A_52_P299964 -1.9599457
A_51_P356389 -0.04976082
A_52_P684402 0
A_51_P414208 -0.5321779
A_51_P280918 -0.465137
A_52_P613688 -0.6552677
A_52_P258194 0.50891685
A_52_P229271 0.48754644
A_52_P214630 -0.36868477
A_52_P579519 0.24708176
A_52_P979997 -0.022570133

Total number of rows: 41266

Table truncated, full table size 955 Kbytes.




Supplementary file Size Download File type/resource
GSM585240.txt.gz 7.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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