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Sample GSM585236 Query DataSets for GSM585236
Status Public on Aug 21, 2010
Title PaS_4factor_1
Sample type RNA
 
Source name Bone marrow PaS (MSC), infected Oct3/4, Sox2, Klf4, and c-Myc
Organism Mus musculus
Characteristics tissue: Bone marrow
cell source: PaS (MSC)
Extracted molecule total RNA
Extraction protocol Total RNA was purified with Trizol (invitrogen) and treated with Turbo DNA-free kit (Ambion) to remove genomic DNA contamination.
Label Cy3
Label protocol Total RNA from ES cells, PαS cells, OB cells, TTF cells and iPS cells were labelled with Cy3.
 
Hybridization protocol Samples were hybridized to a mouse Oligo Microarray (agilent) according to the manufacturer's protocol.
Scan protocol Arrays were scanned with a G2565BA Microarray Scanner System (Agilent).
Data processing Data were analysed using GeneSprings GX software (Agilent).
 
Submission date Aug 19, 2010
Last update date Aug 20, 2010
Contact name Yumi Matsuzaki
E-mail(s) [email protected]
Phone 81-3-5363-3117
Fax 81-3-5363-3566
Organization name Keio University, School of Medicine
Department Physiology
Street address 35 Shinanomachi
City Shinjuku
State/province Tokyo
ZIP/Postal code 160-8582
Country Japan
 
Platform ID GPL7202
Series (1)
GSE23717 Purified mesenchymal stem cells are an efficient source for iPS cell induction

Data table header descriptions
ID_REF
VALUE normalized signal

Data table
ID_REF VALUE
GE_BrightCorner -0.20219898
DarkCorner 0.88927317
A_52_P616356 0.9307108
A_52_P580582 -0.87296677
A_52_P403405 0.66999626
A_52_P819156 0.5203676
A_51_P331831 2.0636454
A_51_P430630 0.89254713
A_52_P502357 0.9163804
A_52_P299964 -0.51010656
A_51_P356389 0
A_52_P684402 0.046186447
A_51_P414208 0.40090322
A_51_P280918 -0.12866831
A_52_P613688 0.5533204
A_52_P258194 0.41328716
A_52_P229271 -0.2733035
A_52_P214630 0.64507675
A_52_P579519 1.6310797
A_52_P979997 0.9109521

Total number of rows: 41266

Table truncated, full table size 953 Kbytes.




Supplementary file Size Download File type/resource
GSM585236.txt.gz 7.9 Mb (ftp)(http) TXT
Processed data included within Sample table

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