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Sample GSM550392 Query DataSets for GSM550392
Status Public on Aug 11, 2010
Title WB-H-1136
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 14
gender: Female
ethnicity: Hispanic
healthy control: pSLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -2.208568 0.6047431
ILMN_2055271 6.348719 0.1475626
ILMN_1736007 3.660517 0.2358366
ILMN_2383229 -6.139295 0.8353096
ILMN_1806310 7.615815 0.1185771
ILMN_1779670 0.9949901 0.3794466
ILMN_2321282 4.149678 0.2187088
ILMN_1671474 12.75895 0.04347826
ILMN_1772582 0.8445727 0.3939394
ILMN_1735698 -0.1992698 0.4650856
ILMN_1653355 13.67808 0.03689064
ILMN_1717783 -2.314276 0.6086956
ILMN_1705025 1.589616 0.342556
ILMN_1814316 -4.647223 0.7641634
ILMN_2359168 -3.432053 0.6785244
ILMN_1731507 -1.937993 0.5876153
ILMN_1787689 5.177571 0.1910408
ILMN_1745607 -5.727514 0.8194993
ILMN_2136495 6.461721 0.1422925
ILMN_1668111 -2.523206 0.6218709

Total number of rows: 48803

Table truncated, full table size 1452 Kbytes.




Supplementary file Size Download File type/resource
GSM550392_4856050051_G_Raw.txt.gz 524.1 Kb (ftp)(http) TXT
Processed data included within Sample table

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