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Sample GSM550389 Query DataSets for GSM550389
Status Public on Aug 11, 2010
Title WB-H-5683
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 24
gender: Female
ethnicity: Asian
healthy control: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 22.13055 0.01844532
ILMN_1660305 162.5891 0
ILMN_1792173 214.4281 0
ILMN_1762337 -6.988801 0.8695652
ILMN_2055271 10.50794 0.07641634
ILMN_1736007 0.7226374 0.3636364
ILMN_1814316 -12.61422 0.9868248
ILMN_2359168 0.2373817 0.3886693
ILMN_1731507 3.932063 0.2252964
ILMN_1787689 -1.92398 0.5533597
ILMN_1745607 -2.429136 0.5876153
ILMN_2136495 -0.1868707 0.4176548
ILMN_1668111 -3.705979 0.6772069
ILMN_2295559 -3.20903 0.6403162
ILMN_1735045 -2.77218 0.6126482
ILMN_1680754 -0.5035372 0.4453228
ILMN_2375184 -4.317265 0.7193676
ILMN_1659452 4.52296 0.201581
ILMN_1767388 -10.64059 0.9604743
ILMN_1675204 -12.60673 0.9868248

Total number of rows: 48803

Table truncated, full table size 1457 Kbytes.




Supplementary file Size Download File type/resource
GSM550389_4809000051_G_Raw.txt.gz 524.0 Kb (ftp)(http) TXT
Processed data included within Sample table

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