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Sample GSM550388 Query DataSets for GSM550388
Status Public on Aug 11, 2010
Title WB-H-4276
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 7
gender: Male
ethnicity: Caucasian
healthy control: Strep and Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -2.545272 0.6969697
ILMN_2055271 3.052727 0.1923584
ILMN_1736007 -1.677523 0.599473
ILMN_2383229 -4.167235 0.8036891
ILMN_1806310 -2.04966 0.6389987
ILMN_1779670 6.17213 0.09486166
ILMN_2321282 9.89814 0.03162055
ILMN_1671474 0.4134936 0.4071146
ILMN_1772582 6.295486 0.09090909
ILMN_1735698 5.975564 0.1027668
ILMN_1653355 14.21335 0.01317523
ILMN_1717783 -0.576498 0.5098814
ILMN_1705025 -0.131368 0.4677207
ILMN_1814316 -3.712716 0.7865613
ILMN_2359168 -0.5306877 0.5072464
ILMN_1731507 0.777765 0.3636364
ILMN_1787689 7.150052 0.07114624
ILMN_1745607 0.3165473 0.4163373
ILMN_2136495 0.8006625 0.3610013
ILMN_1668111 6.159149 0.09486166

Total number of rows: 48803

Table truncated, full table size 1468 Kbytes.




Supplementary file Size Download File type/resource
GSM550388_4676163088_F_Raw.txt.gz 524.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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