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Sample GSM550384 Query DataSets for GSM550384
Status Public on Aug 11, 2010
Title WB-H-8550
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 7
gender: Male
ethnicity: Caucasian
healthy control: Strep and Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -1.427365 0.5388669
ILMN_2055271 6.284475 0.1277997
ILMN_1736007 -1.330454 0.5335968
ILMN_2383229 4.012856 0.2068511
ILMN_1806310 4.127038 0.2002635
ILMN_1779670 -2.26509 0.6166008
ILMN_2321282 3.65172 0.2239789
ILMN_1671474 -0.0654903 0.4400527
ILMN_1772582 -4.665617 0.801054
ILMN_1735698 3.670582 0.2239789
ILMN_1653355 3.74053 0.2200263
ILMN_1717783 -1.570251 0.5480896
ILMN_1705025 6.958674 0.1119895
ILMN_1814316 -5.906809 0.8801054
ILMN_2359168 5.187976 0.1541502
ILMN_1731507 -3.231758 0.6930171
ILMN_1787689 6.098676 0.1304348
ILMN_1745607 5.713681 0.1422925
ILMN_2136495 -4.356112 0.7773386
ILMN_1668111 -0.6291086 0.4703557

Total number of rows: 48803

Table truncated, full table size 1463 Kbytes.




Supplementary file Size Download File type/resource
GSM550384_4676163060_L_Raw.txt.gz 526.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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