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Sample GSM550376 Query DataSets for GSM550376
Status Public on Aug 11, 2010
Title WB-H-9357
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 6
gender: Female
ethnicity: Hispanic
healthy control: Strep and Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -6.586271 0.7220026
ILMN_2055271 8.606662 0.1646904
ILMN_1736007 -0.4501763 0.4216074
ILMN_2383229 -4.412192 0.6034256
ILMN_1806310 -5.29322 0.6495389
ILMN_1779670 -8.478581 0.8208169
ILMN_2321282 3.37972 0.2806324
ILMN_1671474 -7.030659 0.7470356
ILMN_1772582 -4.628509 0.6126482
ILMN_1735698 -2.135378 0.483531
ILMN_1653355 11.78581 0.1304348
ILMN_1717783 -6.962589 0.7417655
ILMN_1705025 -5.936456 0.6811594
ILMN_1814316 -11.20417 0.9288538
ILMN_2359168 -3.56134 0.5612648
ILMN_1731507 6.714867 0.1949934
ILMN_1787689 14.25977 0.1080369
ILMN_1745607 -8.125894 0.7997365
ILMN_2136495 -1.517281 0.4611331
ILMN_1668111 -5.761134 0.6732543

Total number of rows: 48803

Table truncated, full table size 1487 Kbytes.




Supplementary file Size Download File type/resource
GSM550376_4676163046_F_Raw.txt.gz 531.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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