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Sample GSM550361 Query DataSets for GSM550361
Status Public on Aug 11, 2010
Title WB-H-5679-2
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 16
gender: Female
ethnicity: Hispanic
healthy control: pSLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -14.21536 0.9301713
ILMN_2055271 11.64225 0.1357049
ILMN_1736007 1.141817 0.3794466
ILMN_2383229 -7.335673 0.71278
ILMN_1806310 -10.14976 0.8313571
ILMN_1779670 -14.0987 0.9262187
ILMN_2321282 26.49761 0.03162055
ILMN_1671474 0.7357944 0.3952569
ILMN_1772582 0.4211196 0.4071146
ILMN_1735698 6.453327 0.2226614
ILMN_1653355 19.12363 0.06455863
ILMN_1717783 -13.08641 0.9077734
ILMN_1705025 -1.276084 0.4716733
ILMN_1814316 -13.8299 0.9222661
ILMN_2359168 -11.10499 0.85639
ILMN_1731507 -9.392905 0.798419
ILMN_1787689 11.65244 0.1343874
ILMN_1745607 -13.37545 0.9104084
ILMN_2136495 -5.419863 0.6403162
ILMN_1668111 2.788295 0.3214756

Total number of rows: 48803

Table truncated, full table size 1485 Kbytes.




Supplementary file Size Download File type/resource
GSM550361_4493594552_L_Raw.txt.gz 531.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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