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Sample GSM550360 Query DataSets for GSM550360
Status Public on Aug 11, 2010
Title WB-H-2804-2
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 14
gender: Male
ethnicity: Hispanic
healthy control: pSLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -8.998342 0.7997365
ILMN_2055271 33.57582 0.01844532
ILMN_1736007 0.2640536 0.4031621
ILMN_2383229 -12.49086 0.914361
ILMN_1806310 12.05885 0.1172596
ILMN_1779670 -1.262179 0.4650856
ILMN_2321282 2.322791 0.3386034
ILMN_1671474 1.094138 0.370224
ILMN_1772582 -4.09168 0.5823452
ILMN_1735698 2.115453 0.345191
ILMN_1653355 29.57786 0.02503294
ILMN_1717783 -11.02531 0.8787879
ILMN_1705025 11.90773 0.1225296
ILMN_1814316 -6.88886 0.715415
ILMN_2359168 -8.421274 0.7773386
ILMN_1731507 -3.428551 0.5533597
ILMN_1787689 9.767966 0.1594203
ILMN_1745607 7.857508 0.1936759
ILMN_2136495 -10.51814 0.8669302
ILMN_1668111 -5.687685 0.6666667

Total number of rows: 48803

Table truncated, full table size 1476 Kbytes.




Supplementary file Size Download File type/resource
GSM550360_4493594552_K_Raw.txt.gz 528.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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