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Sample GSM550351 Query DataSets for GSM550351
Status Public on Aug 11, 2010
Title WB-H-4556
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 84
gender: Female
ethnicity: Caucasian
healthy control: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -15.7366 0.9789196
ILMN_2055271 -1.746953 0.5164691
ILMN_1736007 3.621354 0.2687747
ILMN_2383229 -9.898971 0.9156785
ILMN_1806310 8.664509 0.140975
ILMN_1779670 -0.5259072 0.4440053
ILMN_2321282 9.669022 0.115942
ILMN_1671474 -5.471148 0.7285903
ILMN_1772582 13.0401 0.07773386
ILMN_1735698 -2.252134 0.5454546
ILMN_1653355 23.93317 0.01449275
ILMN_1717783 -8.937861 0.884058
ILMN_1705025 -1.117282 0.4848485
ILMN_1814316 -2.658363 0.5665349
ILMN_2359168 -5.987923 0.7602108
ILMN_1731507 2.421062 0.312253
ILMN_1787689 -1.608683 0.5085639
ILMN_1745607 5.640611 0.2108037
ILMN_2136495 -11.11822 0.9433465
ILMN_1668111 -2.511181 0.5599473

Total number of rows: 48803

Table truncated, full table size 1489 Kbytes.




Supplementary file Size Download File type/resource
GSM550351_4487653205_B_Raw.txt.gz 528.0 Kb (ftp)(http) TXT
Processed data included within Sample table

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