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Sample GSM550343 Query DataSets for GSM550343
Status Public on Aug 11, 2010
Title WB-H-1055
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 55
gender: Female
ethnicity: Caucasian
healthy control: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -3.798536 0.6877471
ILMN_2055271 22.29991 0.01054018
ILMN_1736007 -2.968373 0.6416337
ILMN_2383229 1.66886 0.3438735
ILMN_1806310 2.099623 0.3241107
ILMN_1779670 9.203754 0.09222662
ILMN_2321282 5.363988 0.1884058
ILMN_1671474 11.72734 0.06060606
ILMN_1772582 2.986941 0.2740448
ILMN_1735698 7.370098 0.1291173
ILMN_1653355 20.07411 0.01054018
ILMN_1717783 -9.666275 0.9407114
ILMN_1705025 2.03072 0.3346508
ILMN_1814316 -3.541062 0.6798419
ILMN_2359168 -3.794734 0.6877471
ILMN_1731507 4.481116 0.2160738
ILMN_1787689 -3.857478 0.6916996
ILMN_1745607 -2.177016 0.5849802
ILMN_2136495 -10.18043 0.9525692
ILMN_1668111 -2.251859 0.5876153

Total number of rows: 48803

Table truncated, full table size 1475 Kbytes.




Supplementary file Size Download File type/resource
GSM550343_4487653181_D_Raw.txt.gz 525.8 Kb (ftp)(http) TXT
Processed data included within Sample table

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