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Sample GSM550341 Query DataSets for GSM550341
Status Public on Aug 11, 2010
Title WB-H-1051
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 53
gender: Female
ethnicity: Caucasian
healthy control: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -2.010307 0.5981554
ILMN_2055271 16.24997 0.01449275
ILMN_1736007 -1.155939 0.5191041
ILMN_2383229 -3.930674 0.7602108
ILMN_1806310 -3.223334 0.6930171
ILMN_1779670 4.986868 0.1501976
ILMN_2321282 4.619961 0.1620553
ILMN_1671474 1.759144 0.3109354
ILMN_1772582 -0.2765932 0.4519104
ILMN_1735698 6.059954 0.1185771
ILMN_1653355 13.35351 0.02239789
ILMN_1717783 -0.0665899 0.4387352
ILMN_1705025 5.005776 0.1501976
ILMN_1814316 -7.69645 0.9446641
ILMN_2359168 2.74601 0.2371542
ILMN_1731507 -3.690977 0.7338603
ILMN_1787689 4.095364 0.1831357
ILMN_1745607 -6.115902 0.9025033
ILMN_2136495 -2.087981 0.6021081
ILMN_1668111 -8.206404 0.9552042

Total number of rows: 48803

Table truncated, full table size 1472 Kbytes.




Supplementary file Size Download File type/resource
GSM550341_4487653173_B_Raw.txt.gz 524.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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