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Sample GSM550336 Query DataSets for GSM550336
Status Public on Aug 11, 2010
Title WB-H-6726
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 30
gender: Male
ethnicity: Caucasian
healthy control: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 48.65821 0
ILMN_1660305 186.2949 0
ILMN_1792173 218.1298 0
ILMN_1762337 -0.07018117 0.455863
ILMN_2055271 -1.459108 0.5704875
ILMN_1736007 6.074151 0.1040843
ILMN_1814316 -3.49848 0.7457181
ILMN_2359168 -4.732312 0.8300395
ILMN_1731507 0.9466803 0.3596838
ILMN_1787689 8.652719 0.04874835
ILMN_1745607 -5.043897 0.8524374
ILMN_2136495 -0.7401708 0.5177866
ILMN_1668111 -9.151336 0.9828722
ILMN_2295559 4.237749 0.168643
ILMN_1735045 0.8525509 0.3675889
ILMN_1680754 -0.1637149 0.4611331
ILMN_2375184 4.866278 0.1449275
ILMN_1659452 3.370353 0.2081686
ILMN_1767388 0.3204241 0.4176548
ILMN_1675204 -6.755713 0.9249012

Total number of rows: 48803

Table truncated, full table size 1458 Kbytes.




Supplementary file Size Download File type/resource
GSM550336_4447846338_K_Raw.txt.gz 523.8 Kb (ftp)(http) TXT
Processed data included within Sample table

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