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Sample GSM550335 Query DataSets for GSM550335
Status Public on Aug 11, 2010
Title WB-H-6725
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 20
gender: Female
ethnicity: Caucasian
healthy control: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 26.06333 0.005270092
ILMN_1660305 140.2658 0
ILMN_1792173 173.8294 0
ILMN_1762337 0.08585249 0.3965744
ILMN_2055271 0.7175277 0.3583663
ILMN_1736007 -2.875964 0.6772069
ILMN_1814316 1.940027 0.2898551
ILMN_2359168 0.2181321 0.3913043
ILMN_1731507 -9.077438 0.9815547
ILMN_1787689 2.375289 0.2674572
ILMN_1745607 -7.629899 0.9552042
ILMN_2136495 1.47093 0.3175231
ILMN_1668111 -2.943321 0.6864295
ILMN_2295559 2.636084 0.2463768
ILMN_1735045 -4.243738 0.7786561
ILMN_1680754 4.532096 0.1594203
ILMN_2375184 4.470541 0.1594203
ILMN_1659452 3.884882 0.1910408
ILMN_1767388 -3.263625 0.7114624
ILMN_1675204 -8.493403 0.969697

Total number of rows: 48803

Table truncated, full table size 1472 Kbytes.




Supplementary file Size Download File type/resource
GSM550335_4447846337_I_Raw.txt.gz 523.7 Kb (ftp)(http) TXT
Processed data included within Sample table

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