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Sample GSM550326 Query DataSets for GSM550326
Status Public on Aug 11, 2010
Title WB-H-2865
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 25
gender: Male
ethnicity: Caucasian
healthy control: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 56.02021 0.003952569
ILMN_1660305 146.2875 0
ILMN_1792173 114.5259 0
ILMN_1762337 -5.231386 0.8247694
ILMN_2055271 14.93359 0.03820817
ILMN_1736007 -0.9654631 0.4255599
ILMN_1814316 -4.742879 0.7799736
ILMN_2359168 2.591622 0.2252964
ILMN_1731507 -5.792758 0.8642951
ILMN_1787689 3.043957 0.2108037
ILMN_1745607 -3.211443 0.6245059
ILMN_2136495 -3.409597 0.6389987
ILMN_1668111 -5.28308 0.8247694
ILMN_2295559 -4.955036 0.7971014
ILMN_1735045 -0.3745579 0.3952569
ILMN_1680754 2.075162 0.2555995
ILMN_2375184 -0.6845919 0.4123847
ILMN_1659452 10.59223 0.07246377
ILMN_1767388 4.34579 0.168643
ILMN_1675204 -11.49817 1

Total number of rows: 48803

Table truncated, full table size 1473 Kbytes.




Supplementary file Size Download File type/resource
GSM550326_4335991004_F_Raw.txt.gz 526.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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