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Sample GSM550320 Query DataSets for GSM550320
Status Public on Aug 11, 2010
Title WB-H-2862
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 28
gender: Female
ethnicity: Caucasian
healthy control: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 03, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 32.12666 0.0171278
ILMN_1660305 146.582 0
ILMN_1792173 169.6083 0
ILMN_1762337 -3.534588 0.5915679
ILMN_2055271 19.27974 0.04611331
ILMN_1736007 1.15408 0.2951252
ILMN_1814316 -6.345595 0.8050066
ILMN_2359168 3.456591 0.1963109
ILMN_1731507 -6.323428 0.8023716
ILMN_1787689 8.361262 0.1119895
ILMN_1745607 -7.903544 0.8998682
ILMN_2136495 -6.162742 0.7878788
ILMN_1668111 -7.802911 0.8945981
ILMN_2295559 -3.286986 0.571805
ILMN_1735045 -1.141551 0.4176548
ILMN_1680754 7.606735 0.115942
ILMN_2375184 1.76993 0.2674572
ILMN_1659452 5.492471 0.1462451
ILMN_1767388 -0.2358661 0.3623188
ILMN_1675204 -12.2107 0.9973649

Total number of rows: 48803

Table truncated, full table size 1477 Kbytes.




Supplementary file Size Download File type/resource
GSM550320_4335991001_D_Raw.txt.gz 527.0 Kb (ftp)(http) TXT
Processed data included within Sample table

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