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Sample GSM549515 Query DataSets for GSM549515
Status Public on Aug 11, 2010
Title WB-PSLE-9632
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 12
gender: Female
ethnicity: Caucasian
illness: PSLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -3.122299 0.6047431
ILMN_2055271 35.94138 0.009222661
ILMN_1736007 6.181941 0.201581
ILMN_2383229 -5.90033 0.7272727
ILMN_1806310 -3.86421 0.629776
ILMN_1779670 9.54751 0.1264822
ILMN_2321282 12.34594 0.08959157
ILMN_1671474 1.494284 0.3781291
ILMN_1772582 -14.44071 0.9578393
ILMN_1735698 5.766641 0.2068511
ILMN_1653355 38.00378 0.007905139
ILMN_1717783 16.83307 0.05006588
ILMN_1705025 -0.4485315 0.4743083
ILMN_1814316 -6.698826 0.7654809
ILMN_2359168 -1.453235 0.5243742
ILMN_1731507 -11.97045 0.9288538
ILMN_1787689 13.37997 0.08168643
ILMN_1745607 -5.260237 0.6982872
ILMN_2136495 -5.410232 0.7061924
ILMN_1668111 -11.34119 0.914361

Total number of rows: 48803

Table truncated, full table size 1480 Kbytes.




Supplementary file Size Download File type/resource
GSM549515_4856076053_A_Raw.txt.gz 528.6 Kb (ftp)(http) TXT
Processed data included within Sample table

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