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Sample GSM549497 Query DataSets for GSM549497
Status Public on Aug 11, 2010
Title WB-PSLE-8965
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 18
gender: Female
ethnicity: African American
illness: PSLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -9.069374 0.9486166
ILMN_2055271 9.85699 0.06192358
ILMN_1736007 6.195711 0.1212121
ILMN_2383229 -0.3276887 0.4545455
ILMN_1806310 3.650711 0.2318841
ILMN_1779670 0.2328187 0.4255599
ILMN_2321282 0.6212928 0.3965744
ILMN_1671474 -0.4502944 0.458498
ILMN_1772582 -0.7861254 0.4782609
ILMN_1735698 5.49867 0.14361
ILMN_1653355 30.06073 0.003952569
ILMN_1717783 1.595083 0.3412385
ILMN_1705025 4.08035 0.2173913
ILMN_1814316 1.7407 0.3372859
ILMN_2359168 -5.945859 0.8353096
ILMN_1731507 -3.782418 0.7088274
ILMN_1787689 4.075968 0.2173913
ILMN_1745607 3.347477 0.2437418
ILMN_2136495 -6.980705 0.8814229
ILMN_1668111 -2.011714 0.5862978

Total number of rows: 48803

Table truncated, full table size 1506 Kbytes.




Supplementary file Size Download File type/resource
GSM549497_4856050053_K_Raw.txt.gz 532.1 Kb (ftp)(http) TXT
Processed data included within Sample table

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