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Sample GSM549487 Query DataSets for GSM549487
Status Public on Aug 11, 2010
Title WB-PSLE-2610
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 18
gender: Female
ethnicity: Hispanic
illness: PSLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -0.3648968 0.4743083
ILMN_2055271 11.76648 0.04874835
ILMN_1736007 -7.506892 0.8708827
ILMN_2383229 -8.795783 0.9130435
ILMN_1806310 1.80309 0.3530962
ILMN_1779670 8.263114 0.08959157
ILMN_2321282 0.7880586 0.4150198
ILMN_1671474 6.724481 0.1343874
ILMN_1772582 2.706395 0.3083004
ILMN_1735698 4.378442 0.226614
ILMN_1653355 16.61878 0.02239789
ILMN_1717783 -3.537238 0.6745718
ILMN_1705025 1.768741 0.3557312
ILMN_1814316 0.4492193 0.43083
ILMN_2359168 -0.4439196 0.4769433
ILMN_1731507 -5.842579 0.8102767
ILMN_1787689 3.98902 0.2397892
ILMN_1745607 -1.098785 0.5296443
ILMN_2136495 0.0841257 0.4532279
ILMN_1668111 -4.96498 0.7588933

Total number of rows: 48803

Table truncated, full table size 1486 Kbytes.




Supplementary file Size Download File type/resource
GSM549487_4856050051_F_Raw.txt.gz 529.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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