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Sample GSM549480 Query DataSets for GSM549480
Status Public on Aug 11, 2010
Title WB-PSLE-1914
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 9
gender: Female
ethnicity: Hispanic
illness: PSLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 4.857106 0.1805007
ILMN_2055271 13.48654 0.03293808
ILMN_1736007 0.7484707 0.3965744
ILMN_2383229 -1.400742 0.5494071
ILMN_1806310 -6.988766 0.8550724
ILMN_1779670 3.831191 0.2279315
ILMN_2321282 -0.8246872 0.5125165
ILMN_1671474 7.075076 0.1317523
ILMN_1772582 0.9639481 0.3860343
ILMN_1735698 7.087476 0.1317523
ILMN_1653355 11.73594 0.05270092
ILMN_1717783 -5.51566 0.801054
ILMN_1705025 3.605595 0.2411067
ILMN_1814316 -8.108895 0.8893281
ILMN_2359168 -3.86555 0.7101449
ILMN_1731507 -3.897454 0.7101449
ILMN_1787689 2.972743 0.2740448
ILMN_1745607 -3.864275 0.7101449
ILMN_2136495 -1.715763 0.571805
ILMN_1668111 -11.3452 0.9683794

Total number of rows: 48803

Table truncated, full table size 1481 Kbytes.




Supplementary file Size Download File type/resource
GSM549480_4856050050_F_Raw.txt.gz 527.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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