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Sample GSM549457 Query DataSets for GSM549457
Status Public on Aug 11, 2010
Title WB-Staph-9556
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 1
gender: Female
ethnicity: Caucasian
illness: Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -2.623541 0.5309618
ILMN_2055271 7.22582 0.140975
ILMN_1736007 0.9420738 0.3346508
ILMN_2383229 -7.161391 0.8379447
ILMN_1806310 -10.49483 0.9683794
ILMN_1779670 -0.5872897 0.4176548
ILMN_2321282 30.45807 0.01449275
ILMN_1671474 -2.707846 0.5349144
ILMN_1772582 6.726079 0.1554677
ILMN_1735698 -6.628992 0.801054
ILMN_1653355 13.86719 0.06192358
ILMN_1717783 -8.506959 0.9025033
ILMN_1705025 -1.816563 0.4888011
ILMN_1814316 -7.117419 0.8353096
ILMN_2359168 -6.527248 0.7971014
ILMN_1731507 -1.645904 0.4769433
ILMN_1787689 5.364047 0.1976285
ILMN_1745607 -1.411071 0.4637681
ILMN_2136495 -6.661618 0.8023716
ILMN_1668111 -3.732408 0.6126482

Total number of rows: 48803

Table truncated, full table size 1477 Kbytes.




Supplementary file Size Download File type/resource
GSM549457_4676163064_G_Raw.txt.gz 530.0 Kb (ftp)(http) TXT
Processed data included within Sample table

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