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Sample GSM549452 Query DataSets for GSM549452
Status Public on Aug 11, 2010
Title WB-Staph-9601
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 1
gender: Male
ethnicity: African American
illness: Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -6.877068 0.8234519
ILMN_2055271 3.093475 0.284585
ILMN_1736007 1.840793 0.3306983
ILMN_2383229 -13.07393 0.9815547
ILMN_1806310 -6.55666 0.8089592
ILMN_1779670 -4.174856 0.6495389
ILMN_2321282 -2.713084 0.5652174
ILMN_1671474 -1.448564 0.4901186
ILMN_1772582 -0.9927362 0.4677207
ILMN_1735698 -4.75243 0.6943346
ILMN_1653355 13.75678 0.0513834
ILMN_1717783 -9.657716 0.9064559
ILMN_1705025 -3.063559 0.5823452
ILMN_1814316 -1.682508 0.5098814
ILMN_2359168 -9.243221 0.8959157
ILMN_1731507 -0.3088017 0.4361001
ILMN_1787689 -1.210581 0.4795784
ILMN_1745607 2.650531 0.3017128
ILMN_2136495 -10.38866 0.9354414
ILMN_1668111 -6.784583 0.8168643

Total number of rows: 48803

Table truncated, full table size 1479 Kbytes.




Supplementary file Size Download File type/resource
GSM549452_4676163064_B_Raw.txt.gz 531.1 Kb (ftp)(http) TXT
Processed data included within Sample table

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