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Sample GSM549433 Query DataSets for GSM549433
Status Public on Aug 11, 2010
Title WB-Staph-1338
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 1
gender: Female
ethnicity: Hispanic
illness: Staph
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -4.632474 0.7457181
ILMN_2055271 4.649981 0.2200263
ILMN_1736007 8.271854 0.1106719
ILMN_2383229 -6.321427 0.8208169
ILMN_1806310 -2.129504 0.6060606
ILMN_1779670 3.390118 0.2753623
ILMN_2321282 4.880602 0.2094862
ILMN_1671474 -2.342049 0.6139657
ILMN_1772582 9.89625 0.07905138
ILMN_1735698 -4.316753 0.7285903
ILMN_1653355 17.11291 0.02371541
ILMN_1717783 5.386469 0.1910408
ILMN_1705025 2.311166 0.3280632
ILMN_1814316 -10.04194 0.9446641
ILMN_2359168 3.790093 0.2503294
ILMN_1731507 -5.822446 0.798419
ILMN_1787689 8.749505 0.1001318
ILMN_1745607 3.705913 0.259552
ILMN_2136495 -5.286063 0.7747036
ILMN_1668111 -10.85834 0.9578393

Total number of rows: 48803

Table truncated, full table size 1468 Kbytes.




Supplementary file Size Download File type/resource
GSM549433_4676163048_C_Raw.txt.gz 526.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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