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Sample GSM549420 Query DataSets for GSM549420
Status Public on Aug 11, 2010
Title WB-Still-9686
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 25
gender: Female
ethnicity: Caucasian
illness: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 0.3088762 0.4295125
ILMN_1660305 117.2513 0
ILMN_1792173 143.7103 0
ILMN_1762337 0.9694359 0.4123847
ILMN_2055271 -21.53935 0.9328063
ILMN_1736007 19.06172 0.1185771
ILMN_1814316 -17.42359 0.8814229
ILMN_2359168 -15.67115 0.8511199
ILMN_1731507 -12.79049 0.7918314
ILMN_1787689 7.348001 0.2885376
ILMN_1745607 -17.39512 0.8814229
ILMN_2136495 20.36442 0.1040843
ILMN_1668111 -12.38025 0.7852437
ILMN_2295559 -18.56568 0.9011858
ILMN_1735045 -30.23829 0.9881423
ILMN_1680754 34.33383 0.02766798
ILMN_2375184 17.21385 0.1370224
ILMN_1659452 3.809608 0.3478261
ILMN_1767388 25.19324 0.06192358
ILMN_1675204 -3.638841 0.5638999

Total number of rows: 48803

Table truncated, full table size 1465 Kbytes.




Supplementary file Size Download File type/resource
GSM549420_4676163043_E_Raw.txt.gz 527.4 Kb (ftp)(http) TXT
Processed data included within Sample table

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