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Sample GSM549385 Query DataSets for GSM549385
Status Public on Aug 11, 2010
Title WB-ASLE-8174
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 51
gender: Female
ethnicity: Caucasian
illness: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -2.317753 0.5783926
ILMN_2055271 12.66732 0.04084321
ILMN_1736007 -3.041429 0.6403162
ILMN_2383229 -6.441189 0.8366271
ILMN_1806310 1.609247 0.342556
ILMN_1779670 12.39457 0.04347826
ILMN_2321282 1.132833 0.3741766
ILMN_1671474 5.398769 0.173913
ILMN_1772582 -0.6211764 0.4795784
ILMN_1735698 3.79981 0.2503294
ILMN_1653355 16.54865 0.02239789
ILMN_1717783 -7.548317 0.8880106
ILMN_1705025 3.53339 0.259552
ILMN_1814316 -4.435266 0.7404479
ILMN_2359168 -3.469231 0.6679842
ILMN_1731507 -2.057331 0.5678524
ILMN_1787689 -10.04091 0.9552042
ILMN_1745607 -5.788579 0.7997365
ILMN_2136495 4.709306 0.2042161
ILMN_1668111 -3.751353 0.6916996

Total number of rows: 48803

Table truncated, full table size 1488 Kbytes.




Supplementary file Size Download File type/resource
GSM549385_4487653207_K_Raw.txt.gz 528.5 Kb (ftp)(http) TXT
Processed data included within Sample table

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