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Sample GSM549384 Query DataSets for GSM549384
Status Public on Aug 11, 2010
Title WB-ASLE-8178
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 34
gender: Female
ethnicity: African American
illness: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -0.6586359 0.4611331
ILMN_2055271 24.16716 0.007905139
ILMN_1736007 -3.003835 0.5955204
ILMN_2383229 -1.231733 0.4993412
ILMN_1806310 4.139406 0.2332016
ILMN_1779670 4.563684 0.2213439
ILMN_2321282 9.644485 0.09222662
ILMN_1671474 -7.250575 0.8880106
ILMN_1772582 3.643485 0.2516469
ILMN_1735698 -0.4408178 0.4479578
ILMN_1653355 17.45301 0.03030303
ILMN_1717783 -9.175936 0.9367589
ILMN_1705025 -1.005451 0.4848485
ILMN_1814316 -5.612222 0.7826087
ILMN_2359168 -2.846447 0.5876153
ILMN_1731507 -4.149136 0.6943346
ILMN_1787689 3.020467 0.2753623
ILMN_1745607 -5.422559 0.7694334
ILMN_2136495 -6.604751 0.8577075
ILMN_1668111 -14.53281 0.9960474

Total number of rows: 48803

Table truncated, full table size 1467 Kbytes.




Supplementary file Size Download File type/resource
GSM549384_4487653207_I_Raw.txt.gz 525.6 Kb (ftp)(http) TXT
Processed data included within Sample table

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