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Sample GSM549379 Query DataSets for GSM549379
Status Public on Aug 11, 2010
Title WB-ASLE-7988
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 52
gender: Male
ethnicity: Caucasian
illness: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -8.848694 0.9038208
ILMN_2055271 1.56101 0.3465086
ILMN_1736007 -1.211225 0.5006588
ILMN_2383229 -0.4718797 0.4637681
ILMN_1806310 -3.1401 0.6086956
ILMN_1779670 1.904485 0.3267457
ILMN_2321282 2.520168 0.2964427
ILMN_1671474 -9.151539 0.9222661
ILMN_1772582 2.466325 0.2990777
ILMN_1735698 -4.315499 0.6877471
ILMN_1653355 21.82935 0.0171278
ILMN_1717783 -1.48627 0.5217391
ILMN_1705025 -2.704006 0.5889328
ILMN_1814316 -2.659809 0.5836627
ILMN_2359168 -4.441265 0.7009223
ILMN_1731507 -1.345069 0.5125165
ILMN_1787689 12.37831 0.06324111
ILMN_1745607 -17.09413 0.9973649
ILMN_2136495 -0.8027577 0.4782609
ILMN_1668111 -8.714344 0.8998682

Total number of rows: 48803

Table truncated, full table size 1492 Kbytes.




Supplementary file Size Download File type/resource
GSM549379_4487653192_F_Raw.txt.gz 529.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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