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Sample GSM549371 Query DataSets for GSM549371
Status Public on Aug 11, 2010
Title WB-ASLE-6642
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 46
gender: Female
ethnicity: Hispanic
illness: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -6.820121 0.8695652
ILMN_2055271 5.439271 0.173913
ILMN_1736007 -0.659491 0.4729908
ILMN_2383229 6.528796 0.1370224
ILMN_1806310 1.283496 0.3662714
ILMN_1779670 -2.164865 0.5797101
ILMN_2321282 9.688065 0.07114624
ILMN_1671474 10.27982 0.06455863
ILMN_1772582 -2.328015 0.599473
ILMN_1735698 11.67569 0.04874835
ILMN_1653355 14.68779 0.02766798
ILMN_1717783 -11.50956 0.9828722
ILMN_1705025 10.75765 0.06324111
ILMN_1814316 -0.5618783 0.4703557
ILMN_2359168 10.04484 0.06587616
ILMN_1731507 -0.9195323 0.4940712
ILMN_1787689 6.961416 0.1212121
ILMN_1745607 -1.537081 0.5256917
ILMN_2136495 4.18218 0.2318841
ILMN_1668111 -12.00527 0.9894598

Total number of rows: 48803

Table truncated, full table size 1473 Kbytes.




Supplementary file Size Download File type/resource
GSM549371_4487653181_L_Raw.txt.gz 525.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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