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Sample GSM549367 Query DataSets for GSM549367
Status Public on Aug 11, 2010
Title WB-ASLE-6069
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 28
gender: Female
ethnicity: Asian
illness: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -1.799644 0.5559947
ILMN_2055271 6.280634 0.1080369
ILMN_1736007 5.502619 0.140975
ILMN_2383229 -0.9179662 0.4993412
ILMN_1806310 3.281579 0.2252964
ILMN_1779670 8.577521 0.0685112
ILMN_2321282 2.448632 0.2635046
ILMN_1671474 9.423266 0.05533597
ILMN_1772582 1.853373 0.2885376
ILMN_1735698 5.105291 0.1475626
ILMN_1653355 20.76578 0.01185771
ILMN_1717783 1.118228 0.3465086
ILMN_1705025 7.190907 0.09617918
ILMN_1814316 -2.849828 0.6403162
ILMN_2359168 -3.128792 0.6640316
ILMN_1731507 -6.962028 0.9104084
ILMN_1787689 -4.549309 0.7641634
ILMN_1745607 4.281374 0.1844532
ILMN_2136495 0.9882192 0.3557312
ILMN_1668111 -8.433606 0.9591568

Total number of rows: 48803

Table truncated, full table size 1506 Kbytes.




Supplementary file Size Download File type/resource
GSM549367_4487653181_H_Raw.txt.gz 529.4 Kb (ftp)(http) TXT
Processed data included within Sample table

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