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Sample GSM549364 Query DataSets for GSM549364
Status Public on Aug 11, 2010
Title WB-ASLE-6068
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 28
gender: Male
ethnicity: Hispanic
illness: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 0.5287203 0.3886693
ILMN_2055271 7.269429 0.0974967
ILMN_1736007 9.456901 0.05270092
ILMN_2383229 -3.896964 0.7812912
ILMN_1806310 4.216314 0.1818182
ILMN_1779670 6.194863 0.1238472
ILMN_2321282 9.502328 0.05270092
ILMN_1671474 4.282045 0.1818182
ILMN_1772582 2.605345 0.256917
ILMN_1735698 6.110903 0.1251647
ILMN_1653355 15.76607 0.01185771
ILMN_1717783 -7.90725 0.9591568
ILMN_1705025 3.568328 0.2055336
ILMN_1814316 -3.067079 0.6982872
ILMN_2359168 -5.975642 0.886693
ILMN_1731507 -5.404316 0.8616601
ILMN_1787689 0.1482732 0.4295125
ILMN_1745607 0.793841 0.370224
ILMN_2136495 -0.3609072 0.4664032
ILMN_1668111 -8.875539 0.969697

Total number of rows: 48803

Table truncated, full table size 1465 Kbytes.




Supplementary file Size Download File type/resource
GSM549364_4487653173_L_Raw.txt.gz 522.4 Kb (ftp)(http) TXT
Processed data included within Sample table

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