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Sample GSM549361 Query DataSets for GSM549361
Status Public on Aug 11, 2010
Title WB-ASLE-5671
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 29
gender: Female
ethnicity: Asian
illness: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 1.320435 0.3333333
ILMN_2055271 8.869499 0.05270092
ILMN_1736007 0.08901589 0.4466403
ILMN_2383229 1.180757 0.3504611
ILMN_1806310 0.1128384 0.4453228
ILMN_1779670 1.030226 0.3649539
ILMN_2321282 4.137091 0.1541502
ILMN_1671474 6.483081 0.08695652
ILMN_1772582 1.492702 0.3201581
ILMN_1735698 5.518907 0.1054018
ILMN_1653355 13.25494 0.02503294
ILMN_1717783 -3.567786 0.7602108
ILMN_1705025 4.117931 0.1567852
ILMN_1814316 -3.906851 0.7865613
ILMN_2359168 -2.882044 0.7022398
ILMN_1731507 -8.869962 0.9815547
ILMN_1787689 2.592093 0.2279315
ILMN_1745607 -6.439534 0.9275362
ILMN_2136495 -2.717475 0.6890646
ILMN_1668111 -3.291495 0.7351779

Total number of rows: 48803

Table truncated, full table size 1459 Kbytes.




Supplementary file Size Download File type/resource
GSM549361_4487653173_I_Raw.txt.gz 521.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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