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Sample GSM549359 Query DataSets for GSM549359
Status Public on Aug 11, 2010
Title WB-ASLE-5321
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 36
gender: Female
ethnicity: Caucasian
illness: ASLE
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1762337 -0.478388 0.4716733
ILMN_2055271 -2.73362 0.6693017
ILMN_1736007 2.660622 0.2463768
ILMN_2383229 -7.242724 0.9525692
ILMN_1806310 -4.840176 0.8524374
ILMN_1779670 8.91209 0.04611331
ILMN_2321282 8.676982 0.05401845
ILMN_1671474 -0.4053146 0.4677207
ILMN_1772582 6.042357 0.1093544
ILMN_1735698 2.756727 0.2358366
ILMN_1653355 14.31175 0.01844532
ILMN_1717783 1.001348 0.3583663
ILMN_1705025 7.747082 0.06982872
ILMN_1814316 -8.950323 0.9881423
ILMN_2359168 0.002896382 0.4334651
ILMN_1731507 -10.25906 0.9973649
ILMN_1787689 -0.9288322 0.5111989
ILMN_1745607 0.09824163 0.4242424
ILMN_2136495 -4.579078 0.8353096
ILMN_1668111 -5.0035 0.8590251

Total number of rows: 48803

Table truncated, full table size 1479 Kbytes.




Supplementary file Size Download File type/resource
GSM549359_4487653173_G_Raw.txt.gz 523.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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