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Sample GSM549348 Query DataSets for GSM549348
Status Public on Aug 11, 2010
Title WB-Still-6167
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 63
gender: Female
ethnicity: Native American
illness: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 7.823468 0.0974967
ILMN_1660305 95.93024 0.001317523
ILMN_1792173 119.6203 0.001317523
ILMN_1762337 2.228687 0.2793149
ILMN_2055271 13.90798 0.03293808
ILMN_1736007 -0.278871 0.4216074
ILMN_1814316 1.289084 0.3293808
ILMN_2359168 3.59883 0.229249
ILMN_1731507 -1.693097 0.5335968
ILMN_1787689 3.752747 0.2239789
ILMN_1745607 -6.181082 0.8353096
ILMN_2136495 -1.863823 0.5388669
ILMN_1668111 -5.16168 0.7681159
ILMN_2295559 9.087476 0.07641634
ILMN_1735045 -4.366497 0.71278
ILMN_1680754 5.023729 0.1607378
ILMN_2375184 -3.132486 0.629776
ILMN_1659452 2.352123 0.2714097
ILMN_1767388 6.773482 0.1172596
ILMN_1675204 -8.387024 0.9288538

Total number of rows: 48803

Table truncated, full table size 1512 Kbytes.




Supplementary file Size Download File type/resource
GSM549348_4433719012_E_Raw.txt.gz 530.6 Kb (ftp)(http) TXT
Processed data included within Sample table

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