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Sample GSM549347 Query DataSets for GSM549347
Status Public on Aug 11, 2010
Title WB-Still-6038
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 27
gender: Male
ethnicity: Caucasian
illness: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 27.37241 0.01449275
ILMN_1660305 73.75639 0.001317523
ILMN_1792173 51.98497 0.002635046
ILMN_1762337 -5.503876 0.8102767
ILMN_2055271 12.20329 0.04611331
ILMN_1736007 -0.9715499 0.4598155
ILMN_1814316 -1.999219 0.5362319
ILMN_2359168 12.80962 0.04084321
ILMN_1731507 -5.79778 0.8313571
ILMN_1787689 6.106696 0.1343874
ILMN_1745607 -8.756471 0.9525692
ILMN_2136495 -2.139405 0.5507246
ILMN_1668111 -5.206055 0.7865613
ILMN_2295559 3.955293 0.2068511
ILMN_1735045 16.31106 0.02635046
ILMN_1680754 0.038143 0.4031621
ILMN_2375184 0.7319041 0.3623188
ILMN_1659452 2.613154 0.2582345
ILMN_1767388 -1.120447 0.4756258
ILMN_1675204 -11.0662 0.9828722

Total number of rows: 48803

Table truncated, full table size 1485 Kbytes.




Supplementary file Size Download File type/resource
GSM549347_4433719012_D_Raw.txt.gz 528.1 Kb (ftp)(http) TXT
Processed data included within Sample table

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