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Sample GSM549346 Query DataSets for GSM549346
Status Public on Aug 11, 2010
Title WB-Still-5872
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 70
gender: Male
ethnicity: Caucasian
illness: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 30.24306 0.009222661
ILMN_1660305 129.6697 0
ILMN_1792173 207.2147 0
ILMN_1762337 -6.818601 0.8432148
ILMN_2055271 18.79905 0.02635046
ILMN_1736007 -1.833079 0.5217391
ILMN_1814316 0.7009095 0.3675889
ILMN_2359168 2.244655 0.2832675
ILMN_1731507 0.3406585 0.3899868
ILMN_1787689 -2.719914 0.5849802
ILMN_1745607 -1.728293 0.5125165
ILMN_2136495 -1.764016 0.513834
ILMN_1668111 -10.90618 0.9644269
ILMN_2295559 2.614697 0.2608696
ILMN_1735045 12.19393 0.06455863
ILMN_1680754 -1.495776 0.4927536
ILMN_2375184 2.96071 0.2490119
ILMN_1659452 2.980704 0.2463768
ILMN_1767388 0.8661276 0.3544137
ILMN_1675204 -7.578347 0.8787879

Total number of rows: 48803

Table truncated, full table size 1478 Kbytes.




Supplementary file Size Download File type/resource
GSM549346_4424548046_H_Raw.txt.gz 527.2 Kb (ftp)(http) TXT
Processed data included within Sample table

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