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Sample GSM549344 Query DataSets for GSM549344
Status Public on Aug 11, 2010
Title WB-Still-5870
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 64
gender: Female
ethnicity: Caucasian
illness: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 34.7336 0.009222661
ILMN_1660305 145.3804 0
ILMN_1792173 158.0502 0
ILMN_1762337 -6.728526 0.8471673
ILMN_2055271 10.20147 0.07905138
ILMN_1736007 8.033598 0.1093544
ILMN_1814316 -1.450617 0.5098814
ILMN_2359168 0.3484853 0.3873518
ILMN_1731507 -6.7973 0.8537549
ILMN_1787689 3.570414 0.2371542
ILMN_1745607 -4.786667 0.7404479
ILMN_2136495 -8.045959 0.8906456
ILMN_1668111 -2.910085 0.6139657
ILMN_2295559 -0.7833995 0.4677207
ILMN_1735045 4.208389 0.2187088
ILMN_1680754 -0.565574 0.4466403
ILMN_2375184 -0.2053985 0.4216074
ILMN_1659452 19.34125 0.02503294
ILMN_1767388 0.1503732 0.3926219
ILMN_1675204 -7.283202 0.8656126

Total number of rows: 48803

Table truncated, full table size 1469 Kbytes.




Supplementary file Size Download File type/resource
GSM549344_4424548046_F_Raw.txt.gz 524.9 Kb (ftp)(http) TXT
Processed data included within Sample table

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