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Sample GSM549340 Query DataSets for GSM549340
Status Public on Aug 11, 2010
Title WB-Still-2358
Sample type RNA
 
Source name Human whole blood
Organism Homo sapiens
Characteristics age: 37
gender: Female
ethnicity: Native American
illness: Still
Extracted molecule total RNA
Extraction protocol Ambion Temput Isolation kit
Label biotin
Label protocol Biotynlated cRNA were generated following manufacturer protocols using the Illumina TotalPrep Amplification Kit from Ambion.
 
Hybridization protocol Hybridized 12-Sample Beadchip according to manufacturer protocol
Scan protocol SentrixScanVersion 2.3.0.13 (This information is in the .XML file)
Description Whole blood was collected in Tempus tube
Data processing The data were analyzed using BeadStudio version 1.5.1.3 using the average chip normalization method.
 
Submission date Jun 02, 2010
Last update date Aug 11, 2010
Contact name Damien Chaussabel
E-mail(s) [email protected]
Organization name Baylor Institute for Immunology Research
Street address 3434 Live Oak
City Dallas
State/province TX
ZIP/Postal code 75204
Country USA
 
Platform ID GPL6947
Series (2)
GSE19491 Blood Transcriptional Profiles in Human Active and Latent Tuberculosis
GSE22098 Whole blood transcriptional profiles of patients with active tuberculosis (TB) and other inflammatory and infectious diseases

Data table header descriptions
ID_REF ID
VALUE Illumina-calculated Signal intensity
Detection Illumina detection call

Data table
ID_REF VALUE Detection
ILMN_1809034 9.75085 0.09486166
ILMN_1660305 78.38189 0.002635046
ILMN_1792173 53.19332 0.003952569
ILMN_1762337 -6.975002 0.8313571
ILMN_2055271 13.41559 0.05401845
ILMN_1736007 0.7118002 0.3623188
ILMN_1814316 -8.932914 0.8893281
ILMN_2359168 -4.118953 0.657444
ILMN_1731507 -10.31385 0.9262187
ILMN_1787689 -0.1225045 0.4031621
ILMN_1745607 -7.580519 0.8511199
ILMN_2136495 3.447979 0.2463768
ILMN_1668111 -15.27109 0.9947299
ILMN_2295559 0.0116162 0.3939394
ILMN_1735045 -3.034665 0.5757576
ILMN_1680754 -1.439727 0.4795784
ILMN_2375184 -2.510424 0.5388669
ILMN_1659452 2.99917 0.2648221
ILMN_1767388 -0.4441417 0.4255599
ILMN_1675204 -10.73091 0.9354414

Total number of rows: 48803

Table truncated, full table size 1503 Kbytes.




Supplementary file Size Download File type/resource
GSM549340_4424548045_I_Raw.txt.gz 531.3 Kb (ftp)(http) TXT
Processed data included within Sample table

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